CompChem-Database: details for selected entry

DB03358_s0_p0 (3641)

FormulaC11H20N5O14P3
MW539.23
InChIKeyXMLYNNGMODGYOU-XFQJGLOYNA-N
Entry_Date2023-09-01
Net_Charge0
Number_Atoms54
Number_Heavy_Atoms33
Number_Rings3
Number_Bonds56
Rotat_Bonds14
Unbranched_Chain2
Chiral_Centers4
ONatoms19
HB_Donor8
HB_Acceptor10
OpenEye_HB_Donors9
OpenEye_HB_Acceptors8
Lipinski_HB_Donors8
Lipinski_HB_Acceptors19
Lipinski_Violations3
XLogP30
XLogP-3.59
logP-1.7188
PSA320.09
MR112.003
ABS0.17
Solubilityhighly
AggregatorPass
PM7_Heat_of_Formation_kcal_per_mol-700.74126
PM7_Total_Energy_ev-7219.44397
PM7_Electronic_Energy_ev-64171.22968
PM7_Dipole_Debye7.12346
PM7_Point_GroupC1
PM7_HOMO_Energy_ev-6.967
PM7_LUMO_Energy_ev-1.535
PM7_COSMO_Area_square_ang365.16
PM7_COSMO_Volue_cubic_ang504.4
PM7_Electron_Affinity_ev1.535
PM7_Ionization_Energy_ev6.967
PM7_Energy_Gap_ev5.432
PM7_Global_Hardness_ev2.716
PM7_Global_Softness_ev0.36818851251840945
PM7_Chemical_Potential_ev-4.251
PM7_Electronigativity_ev4.251
PM7_Back_Donation_Energy_ev-0.679
PM7_Electrophilicity_ev3.326767488954345
OPENEYE_Name[[(2~{R},3~{S},4~{R},5~{R})-5-(2-amino-7-methyl-6-oxo-8~{H}-purin-3-ium-1-id-9-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate
SMILESc12c([nH+]c([n-]c1=O)N)N(CN2C)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
Canonical_SMILESO[C@@H]1[C@@H](CO[P@](=O)(O[P@@](=O)(OP(=O)(O)O)O)O)O[C@H]([C@@H]1O)N1CN(c2c1[nH]c(N)[nH]c2=O)C
InChI1/C11H20N5O14P3/c1-15-3-16(8-5(15)9(19)14-11(12)13-8)10-7(18)6(17)4(28-10)2-27-32(23,24)30-33(25,26)29-31(20,21)22/h4,6-7,10,17-18H,2-3H2,1H3,(H7,12,13,14,19,20,21,22,23,24,25,26)/f/h13,20-21,23,25H,12H2
InChI_3D1S/C11H21N5O14P3/c1-15-3-16(8-5(15)9(19)14-11(12)13-8)10-7(18)6(17)4(28-10)2-27-32(23,24)30-33(25,26)29-31(20,21)22/h4,6-7,10,13,17-18H,2-3H2,1H3,(H,23,24)(H,25,26)(H3,12,14,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
AuxInfo1/6/N:10,11,5,8,1,6,7,2,3,9,4,16,15,12,13,14,22,23,17,18,24,25,19,26,20,27,28,21,29,30,31,32,33/E:(20,21,22)(23,24)(25,26)/F:10,11,5,8,1,6,7,2,3,9,4,16,15,12,13,14,22,23,17,24,25,18,26,19,27,20,28,21,29,30,31,32,33/E:(20,21)/rA:53cCCCCCCCCCCCN-NNN+NOOOOOOOOOOOOOOPPPHHHHHHHHHHHHHHHHHHHH/rB:d1;s1;;;;s6;s6;s7;;s8;s3s4;s1s5s10;s2s5s9;s2d4;s4;d3;;;;s8s9;s6;s7;;;;;s11;;;d18s24s25s29;d19s26s28s30;d20s27s29s30;s5;s5;s6;s7;s8;s9;s10;s10;s10;s11;s11;s15;s16;s16;s22;s23;s24;s25;s26;s27;/rC:.868,-.5079,0;.868,-1.515,0;;-.868,-1.5137,0;2.4178,-1.0115,0;1.965,-4.3904,0;2.6343,-3.6455,0;1.0521,-3.9822,0;2.1348,-2.7774,0;2.1349,.7541,0;.512,-5.6468,0;-.868,-.5079,0;1.8258,-.1969,0;1.8258,-1.8263,0;0,-2.0116,0;-1.7333,-2.0149,0;0,1,0;-2.9334,-9.7855,0;.846,-7.8578,0;-2.9587,-6.6233,0;1.1523,-2.9869,0;3.3809,-5.4188,0;4.0507,-2.6177,0;-3.576,-8.5257,0;-1.6736,-9.1429,0;-.4138,-8.5003,0;-1.6989,-5.9807,0;.2034,-6.598,0;-2.3162,-7.8831,0;-1.0564,-7.2405,0;-2.6248,-8.8343,0;-.1052,-7.5492,0;-2.0076,-6.9319,0;2.7893,-.6769,0;2.7894,-1.3461,0;1.7146,-4.8232,0;2.969,-4.017,0;.5628,-3.8795,0;2.5917,-2.5743,0;1.6593,.9087,0;2.6104,.5996,0;2.2894,1.2297,0;.9876,-5.8011,0;.0365,-5.4925,0;-.0003,-2.5116,0;-2.1667,-1.7655,0;-1.7326,-2.5149,0;3.3287,-5.9161,0;4.5074,-2.8213,0;-3.9474,-8.8604,0;-1.5695,-9.6319,0;-.0791,-8.8718,0;-2.0337,-5.6093,0;
DuplicatesDB03358_s0_p0
mol2_Path/CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000003250-0000003499/DB03358_s0_p0.mol2
pdbqt_Path/CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000003250-0000003499/DB03358_s0_p0.pdbqt
sdf_Path/CCDB/DrugBank/Database/Compound-0000000000-0000049999/Compound-0000003250-0000003499/DB03358_s0_p0.sdf